Statistical genetics (Baysian)

Bayesian Population Genetic Data Analysis
The BUGS Project - WinBUGS
Statistical Genetics Links
MCMC Preprint Service

Web server for DNA Sequence Analysis

SWBIC - Genomics & DNA Sequence Analysis
The EMBNET Online Teaching Resource
New GENSCAN Web Server at MIT
ESTScan
PipMaker and MultiPipMaker -- DNA alignment
Wise2 Wise2: Intelligent algorithms for DNA searches-- Sanger
SIM4 - a program to align cDNA and genomic DNA
Spidey -- mRNA to genomic alignment server
BOXSHADE-- Sequence Alignment server
MSA -- Multiple Sequence Alignment server
Clustalw server

Apache

Apache HTTP Server Version 1.3 Documentation
Mosaic User Authentication Tutorial

Dave Raggett's Introduction to HTML
HTACCESS DOCUMENTATION
O'Reilly Network: An Amble Through Apache Configuration
Apache directives
Apache download list
mod_perl guide: mod_perl Configuration

Apache Tutorials
Welcome! - The Apache Software Foundation
Web Color Index


web_page_ColorCenter

PHP
PHP: php and mysql examples and resources from WeberDev.com
PHP: php and mysql examples and resources from WeberDev.com

Java

Essentials of the Java(TM) Programming Language, Part 1
The Java Language Environment: Contents
Understanding Java
JavaScript for the World Wide Web: Visual QuickStart Guide, 3rd Edition
Shlurrrpp......Java learning Java : The Java tutorial for java programming
java.sun.com - The Source for Java(TM) Technology
Java 2 Platform SE v1.3
Java Packages_1.03
JAVA_tutorials(good sources)
The Java Tutorial
Companion Website, Chapter 6
Java 3D API Tutorial
Working with Graphics: Examples
Brewing Java: A Tutorial
Java Lecture Notes
Summary_thread
The Java Tutorial FAQ
3132/3192 Java applet examples
Index of /schools/cms/teaching/db/java/sunapplets/demo
Java Download INDEX
BioJava.org - Main Page
Java(TM) Advanced Imaging Tutorial
Pig and Chicken Genome Mapping Site
java.sun.com - Coverage of the 2001 JavaOne(SM) Conference
Java(tm) Plug-in 1.3 Demo Page

data Structure

J2SDK v 1.3.1 Highlights
Compaq Java Product Download Main
HTTPClient V0.3-3
Kweelt

Awk

AWK Language Programming - Table of Contents

C++

DevCentral Learning Center_C++
C++ Annotations Version 4.4.1d
Table Of Contents
SGI - Services & Support: Standard Template Library Programmer's Guide
C++ reference: iostream library
iostream examples
A modest STL tutorial
Standard C++ Library v3 - GNU Project - Free Software Foundation (FSF)
C++ Annotations Version 5.0.0
C Programming Notes

SQL

SQL - Structured Query Language
Interactive/On-line SQL Tutorial with SQL Interpreter & live practice database
Introduction to Structured Query Language
SQL Tutorial
Database Management
Programming tutorials.com - SQL Tutorials
SQL FAQ: Table of Contents
Internet Software Consortium - DBI Mailing Lists
Detailed Table of Contents (SQL turorial)
SourceForge: Project Filelist
MARC: list perl-dbi: srch 'ingres'
Technical Documents: Ingres
Ingres Training
North American Ingres Users Association Homepage

MySQL

MySQL | Documentation | MySQL | By chapter
MySQL
Mysql -- Perl DBI
DevShed - MySQL
Database Central - Database, XML, SQL, ColdFusion, EIP, ASP, & PERL Tips and Tutorials

Fortran

StatLib---Applied Statistics algorithms
Statitistical Software
DIGITAL Fortran 90
Fortran 90 for the Fortran 77 Programmer
Fortran 77 Tutorial
BLAS
LINPACK
LAPACK -- Linear Algebra PACKage
Fortran 90 for the Fortran 77 Programmer(local)
Fortran Tutorials
Linux -- Veridian Systems Products
Alan Miller's Fortran 90 Web Site

UNIX

USAIL: Unix system administration independent learning
R870: Unix System Administration - A Survival Course
Unix Guru Universe
USAIL: Unix system administration independent learning
UW Biostat: Unix Administrators
UNIX Reference Desk
System Administration (4vkt)
qmail: a replacement for sendmail
Unix FAQ/faq Index
qmail: a replacement for sendmail
Unix Systems Administration Notes
Apache Sites: Search Results
Charles Curley - NT Emacs Installation
Directory of /pub/GNU
FreeBSD Handbook
Short Contents
Timo's procmail tips and recipes
DIGITAL UNIX Version 4.0E online documentation
ii.com: Procmail Quick Start
Filtering E-Mail: Procmail
XML Tutorial
SMTP Mail Server Administration
Using newsyslog to rotate files containing logging messages
lastcomm Command
PHP: Manual: PHP Manual
Gimp Documentation
CVS Tutorial - Concurrent Versions System
RCS Tutorial - the Revision Control System

LINUX

Linux System Administrators' Guide 0.6
Linux Documentation Project
rpm finder:Rpmfind.net Server
redhat.com | Red Hat Linux Manuals
redhat.com | Products and Services
HOWTO: Multi Disk System Tuning
The Linux Documentation Project

pigbase

Index of /PiGMaPLink
Pig and Chicken Genome Mapping Site
ANGENMAP Subscription Manager
ArkDB
ResSpeciese
Animal Genome Mapping with the ARK System
ArkDB_editorial_tools
Anubis: Map Selector
University Form Templates
resSpecies Home
resSpecies Home
Max's Lab List
Anubis Genome Viewer: Menu Settings

PERL

CGI Made Really Easy
Perl Wisdom:Databases from Perl
perlthrtut - tutorial on threads in Perl
CGI.pm - a Perl5 CGI Library
Beginner's Guide to CGI Scripting with Perl
CGI Programming 101 - Learn CGI Today!
CGI Tutorial: Start
File download counter for multiple files.
www.perl.com - Report from the Perl Conference
CPAN Combined Search Results
AnyDBM_File - provide framework for multiple DBMs
www.perl.com - Guide to the Perl 6 Working Groups
FMTEYEWTK
DBI - A Database Interface Module for perl5
Apache/Perl Integration Project
mod_perl guide: mod_perl Configuration
search.cpan.org: The CPAN Search Site
bio.perl.org - Main page
Open Bioinformatics Foundation Anonymous CVS Access
Using CGI to Upload Files
The cgi-lib.pl Home Page
FAQ: Frequently Asked Questions about CGI Programming
Perl FAQ Index
CGI 101 Script Library
CGI_LIB.pm -- Perl Module
The CPAN Search Site
CPAN
/home/dag/code/branch-07//bptutorial.pl
PAUSE: pause_04about
perl_doc->pod

parasite

PARASITE GENOME PROJECTS
Who/TDR Malaria Database
Parasite genome databases
ANU - BaMBi - Links - Parasitology
Parasitic Diseases

SAS

kathy
kathy
sampgrafs
SAS/STAT User's Guide
SAS.. The Power to Know
Mathematics Archives - Topics in Mathematics - Statistics

LINKAGE

genetic linkage analysis
KCL: Institute of Psychiatry: Section of Genetic Epidemiology and Biostatistics
Inheritance (pdf)
APM example
UCLA Human Genetics
Reference list for the supported programs:
SimWalk2: Overview

haplotype

EH program for haplotype frequency estimation
SimWalk2: Additional Usage Notes
[MDC:Bioinf:Medseq] Haplotype Estimation
Variagenics : Haplotype Identification
Exercise on haplotype:phenotype associations using nested clade analysis
GENEHUNTER: man pages
Preparing " datafile " for LINKAGE

database

NCBI

Submit to GenBank
Searching GenBank
Entrez-PubMed
UniSTS
NCBI-UniGene
Entrez-PubMed
LocusLink Introduction
GenBank FTP
NCBI: GeneMap'98
Entrez Genome view

SNP

Human Chromosome 21 SNP Database
dbSNP Home Page
Human SNP Database Homepage
HGBASE - Human Genic Bi-Allelic Sequences Database
JSNPs Home
Celera Genomics Launches SNP Reference Database
The SNP Consortium Home Page
In silico SNP Discovery Program
Sequenom RealSNP.com
FlyBase @ flybase2.bio.indiana.edu
HOMOPHILA: HUMAN TO DROSOPHILA DATABASE
OMIM Home Page -- Online Mendelian Inheritance in Man
MySQL Manual | 4.7.1 Quick Installation Overview
SourceForge: Project Filelist
GDB:Reports and Statistics
GeneCards: human genes, maps, proteins and diseases (Weizmann)
Weizmann Institute of Science
TUTORIALS - Sequence Analysis
Pairwise Sequence Alignments
RH Database : List of internal values and codes
SRS6
Directory of /pub/databases/RHdb
Directory of /pub/databases/RHdb
FTP_ebi
CORBA at EBI
RHdb
Computational Services at the EMBL
Directory of /genomes/H_sapiens/maps/mapview
Human Chromosome 2, Mouse Homology Region 2
JDBC(TM) Database Access: Table of Contents
JDBC Basics
Mailgate.ORG Web Server: comp.databases.ingres
The Jackson Laboratory
ScienceDirect - Journals
DATABASE OF GENE KNOCKOUTS
123 Genomics - DNA, protein, genome and other sequence databases
The Institute for Genomic Research
G3_MAPS
BODYMAP - INDEX
Databases available for BLAST search
Gene Ontology Data
SA National Bioinformatics Institute

EST

CBC Bibliography Database
NIH Guide: RAT GENE CATALOG AND EXPRESSED SEQUENCE TAG (EST) MAP
Patenting of Expressed Sequence Tags
Human Genome - EST Clustering Databases
WU GSC: Darwin EST Totals
WU GSC: HUMAN EST Project Home Page
UIowa Rat EST Project
NCBI dbEST
NCBI dbEST
Pig EST database
UD Chick EST Project Home Page
ZmDB: Maize Genome Database: EST Search Tips

microarray

Eisen Lab
MICROARRAYS
microarrays.org - software

WORK

bibliography: linkage algorithms
GENE-LINKAGE FREQUENTLY-ASKED-QUESTIONS
Genetic Linkage Analysis
linkage software list
CRI-MAP - Introduction
CRI-MAP Tutorial - Bibliography & Links
crimap documentation
NIAI_linkage analysis _sql
G-MENDEL - Download your own copy
THE QTL CAFÉ_java applet
QTL Cartographer
MultiQTL - multiple trait & QTL analysis
Mikko J. Sillanpää_Multimapper/OUTBRED/Bayesian QTL mapping software for outbred offspring data
WU GSC: Darwin EST Totals
Ages
SBCMP Download

JHelm

Continental Inn - Santa Cruz, CA
Continental Inn - Santa Cruz, CA
Where To Stay -- Motel & Hotel Accommodations
Photo Gallery home page
Blue Mountain Arts' Electronic Greeting Cards
Annu. Rev. Cell Dev. Biol. -- Archive of Issues by Date
SBCC Welcome Center
Synteny conservation
Human to Mouse Homology Region Map, Chromosome 7
HGMP-RC NIX Session
HMS Beagle
Profile: Everything's Great When It Sits on a Chip
HMS Beagle
NRM_changelinks: Improving Community Participation in Environment & Development
Wildlife Genetics International
HGMP-RC NIX Session
UC Santa Cruz Admissions FAQ
Where To Stay -- Motel & Hotel Accommodations
Theriogenology
GIF image 1000x773 pixels

General on Max Labs

Pig Gene Mapping Coordination Program Links
Max's Lab
Max's Lab
Today's News
Hypertextbook Chapters
ScienceMan Biology Links!
GeneCards: human genes, proteins and diseases (Weizmann)
Applied Genetics Network - Drs. H. Simianer & Ch. Stricker
Genomes Guide: Homo sapiens
GeneCards: human genes, proteins and diseases (Weizmann)
Search using the DBGET system: EMBL-today
GIST
HGBASE - Human Genic Bi Allelic SEquences
Gene
Pig and Chicken Genome Mapping Site
Brown Lab Homepage
othersites.html
Gene Chips (DNA Microarrays) (by Leming Shi, PhD)
Blackwell Science Home Page
TOP 10 Mass Media Romaneasca - Romanian Mass Media TOP 10
University of Iowa Department of Communication Studies

Quatitative genetics

NetForum - ST610E QTL Mapping - Topics
QTL Cartographer
QTL References
ASREML_archive

Molecular genetic materials

GeneCards: human genes, proteins and diseases (Weizmann)
ExPASy Molecular Biology Server
Mammalian Homology Query Results
LocusLink Introduction
IDEAS_BLAST
MGI 2.3.2 - Mouse Genome Informatics (MGI) Main Menu
Search using the DBGET system: EMBL-today
NiceProt View of SWISS-PROT: O02772
Human Gene Nomenclature
Index of /PiGMaPLink
The Genome Database
Genetic Disorders
Office of Science Education and Outreach_NHGRI
Graphics Gallery_molecular_good one(Bio_tech)
Science Maps and Data
new linkage software (10/1995-12/1997)
genetic linkage analysis
crimap documentation
CRI-MAP Manual Table of Contents
Bioinformatics Databases
Lane list of mouse mutations
ANGIS Home Page
BLAST information
NCBI HomePage
Yuan Dan Zhang's Home Page
Yahoo!
Hotmail
Animal Genetics(Journal)
Journal of Animal Science
Index of /~mana
England,Britain,and UK: British visa requirements - how to apply, possible problems, online forms, embassy addresses
DOS/International Information Programs: U.S. Embassies
American Embassy London
Chinese Music
SAS OnlineDoc Applet Frame
Directory listing of /D|/documents/Yuandan Zhang
Directory listing of /C|/users/Yuan
Welcome to dialpad.com
Writing a Paper with LaTeX2e
AGRICOLA
Others
Computer Associates - Ingres II Product Information
Phonecard Onsale - Instant Phonecard
Time Zone Converter - time conversion
Web Cam: Iowa State University
NIH: Grants & Funding Opportunities
Nucleic Acids Research: Instructions to Authors
NCDC: Climate-Watch, December 2001
Nucl. Acids. Res. -- Search
Example of an Applet that plays sound in a loop for Pure Java
Pictures From The SEM
Welcome to the National Center for Genome Resources
java class
INDEX: Trishan's OZ page
Sheep
Ames Public Library
San Diego Badminton Supply
Arlequin's Home on the Web
Amazon.com: Books / Subjects / Computers & Internet
exchange rates for Chinese Renminbi - last 30 days
Contact IMI
Virtual Laboratories in Probability and Statistics
Sign in
Directory listing of /D|/documents/Yuandan Zhang/tutorials/java
Creating a User Interface: Table of Contents
ISU Pig EST Project
Iowa State University
American Embassy London
resSpecies
BioTech: Science Resources
Linkage and Mapping Software at the Weizmann Institute of Science
Welcome to OUBC - frames
BioInformatics - Genzentrum München
Search results for : javascript
JavaScript World --> Welcome!
DevEdge Online - Documentation & Information
BIODATABASES.COM - White Paper
QTL Software Review
Directory of /pub
QTL Cartographer
DNALC: Biology Animation Library
DNALC: PCR Animation
HGMP-RC Frequently Asked Questions
DNA Sequence Analysis: Introduction
CGI/1.0 URL Timezone Converter
WWW BLAST at NCBI
Entrez-PubMed
City of Ames home page
deltathree.com - It's For You...
Current Contents Connect
Secure UNIX Programming FAQ
The Genome Database
Welcome
ARKdb editor (pig): method
Classic 164 Currency Converter
Bioinformatics, Volume 14, Issue 7
genetic linkage analysis
Ingres II Documentation Set
Rohan L. Fernando
Iowa State University -- Library
Hickory -- Software for calculating host specificity
The Comprehensive R Archive Network
CardCall
PACIFIC - Policy Analysis Computing & Information Facility In Commerce
Yahoo! Finance - Currency Conversion AUD=>USD
Yahoo! Finance - Currency Conversion
TradingRoom - Markets Index
Yahoo-armidale weather